- Assessing the role of multiple mechanisms increasing the age of dengue cases in Thailand.
Huang AT, Takahashi S, Salje H, Wang L, Garcia-Carreras B, Anderson K, ... & Cummings DAT.
Proceedings of the National Academy of Sciences, 2022: 119(20), e2115790119.
https://doi.org/10.1073/pnas.2115790119
- Individual, Household, and Community Drivers of Dengue Virus Infection Risk in Kamphaeng Phet Province, Thailand.
Ribeiro dos Santos G, Buddhari D, Iamsirithaworn S, Khampaen D, Ponlawat A, Fansiri T, ... & Cummings DAT, … & Anderson KB.
The Journal of Infectious Diseases, 2022: jiac177
https://doi.org/10.1093/infdis/jiac177
- Beneath the surface: Amino acid variation underlying two decades of dengue virus antigenic dynamics in Bangkok, Thailand.
Huang AT, Salje H, Escoto AC, Chowdhury N, Chávez C, Garcia-Carreras B, ... & Cummings DAT, Katzelnick LC.
PLoS Pathogens, 2022: 18(5), e1010500
https://doi.org/10.1371/journal.ppat.1010500
- Periodic synchronisation of dengue epidemics in Thailand over the last 5 decades driven by temperature and immunity.
García-Carreras B, Yang B, Grabowski MK, Sheppard LW, Huang AT, Salje H, ... & Cummings, DAT.
PLoS Biology, 2022: 20(3), e3001160.
https://doi.org/10.1371/journal.pbio.3001160
- EVITA Dengue: a cluster-randomized controlled trial to EValuate the efficacy of Wolbachia-InfecTed Aedes aegypti mosquitoes in reducing the incidence of Arboviral infection in Brazil.
Collins MH, Potter GE, Hitchings MD, Butler E, Wiles M, Kennedy JK, ... & Cummings DAT, Ko AI, Teixiera M, Edupuganti S
Trials, 2022: 23: 185
https://doi.org/10.1186/s13063-022-05997-4
- Antigenic Evolution of dengue viruses over 20 years.
Katzelnick LC, Coello Escoto A, Huang AT, Garcia-Carreras B, Chowdhury N, Maljkovic Berry I, Chavez C, Buchy P, Duong V, Dussart P, Gromowski G, Macareo L, Thaisomboonsuk B, Fernandez S, Smith DJ, Jarman R, Whitehead SS, Salje H, Cummings DAT.
Science, 2021: 374(6570):999-1004.
https://doi.org/10.1126/science.abk0058
- Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection.
Salje H, Alera MT, Chua MN, Hunsawong T, Ellison D, Srikiatkhachorn A, Jarman RG, Gromowski GD, Rodriguez-Barraquer I, Cauchemez S, Cummings DAT, Macareo L, Yoon IK, Fernandez S, Rothman AL.
Nature Medicine, 2021: 27(8):1395-400.
https://doi.org/10.1038/s41591-021-01392-9
- Lying in wait: the resurgence of dengue virus after the Zika epidemic in Brazil.
Brito AF, Machado LC, Oidtman RJ, Siconelli MJL, Tran QM, Fauver JR, Carvalho RDO, Dezordi FZ, Pereira MR, de Castro-Jorge LA, Minto ECM, Passos LMR, Kalinich CC, Petrone ME, Allen E, España GC, Huang AT, Cummings DAT, Baele G, Franca RFO, da Fonseca BAL, Perkins TA, Wallau GL, Grubaugh ND.
Nature Communications, 2021: 12(1):2619.
https://doi.org/10.1038/s41467-021-22921-7
- Reconstructing unseen transmission events to infer dengue dynamics from viral sequences.
Salje H, Wesolowski A, Brown TS, Kiang MV, Berry IM, Lefrancq N, Fernandez S, Jarman RG, Ruchusatsawat K, Iamsirithaworn S, Vandepitte WP, Suntarattiwong P, Read JM, Klungthong C, Thaisomboonsuk B, Engø-Monsen K, Buckee C, Cauchemez S, Cummings DAT.
Nature Communications, 2021: 12(1):1-10
https://doi.org/10.1038/s41467-021-21888-9
- An Innovative, Prospective, Hybrid Cohort-Cluster Study Design to Characterize Dengue Virus Transmission in Multigenerational Households in Kamphaeng Phet, Thailand.
Anderson KB, Buddhari D, Srikiatkhachorn A, Gromowski GD, Iamsirithaworn S, Weg AL, Ellison DW, Macareo L, Cummings DAT, Yoon IK, Nisalak A.
American Journal of Epidemiology, 2020: 189(7):648-59.
https://doi.org/10.1093/aje/kwaa008
- Mapping global variation in dengue transmission intensity.
Cattarino L, Rodriguez-Barraquer I, Imai N, Cummings DAT, Ferguson NM.
Science Translational Medicine, 2020: 12(528):eaax4144.
https://doi.org/10.1126/scitranslmed.aax4144
- An open challenge to advance probabilistic forecasting for dengue epidemics
Johansson MA, Apfeldorf KM, Dobson S, Devita J, Buczak AL, Baugher B, Moniz LJ, Bagley T, Babin SM, Guven E, Yamana TK, Shaman J, Moschou T, Lothian N, Lane A, Osborne G, Jiang G, Brooks LC, Farrow DC, Hyun S, Tibshirani RJ, Rosenfeld R, Lessler J, Reich NG, Cummings DAT, Lauer SA, Moore SM, Clapham HE, Lowe R, Bailey TC, García-Díez M, Carvalho MS, Rodó X, Sardar T, Paul R, Ray EL, Sakrejda K, Brown AC, Meng X, Osoba O, Vardavas R, Manheim D, Moore M, Rao DM, Porco TC, Ackley S, Liu F, Worden L, Convertino M, Liu Y, Reddy A, Ortiz E, Rivero J, Brito H, Juarrero A, Johnson LR, Gramacy RB, Cohen JM, Mordecai EA, Murdock CC, Rohr JR, Ryan SJ, Stewart-Ibarra AM, Weikel DP, Jutla A, Khan R, Poultney M, Colwell RR, Rivera-García B, Barker CM, Bell JE, Biggerstaff M, Swerdlow D, Mier-Y-Teran-Romero L, Forshey BM, Trtanj J, Asher J, Clay M, Margolis HS, Hebbeler AM, George D, Chretien JP.
Proc Natl Acad Sci U S A, 2019: 116(48):24268-74.
https://doi.org/10.1073/pnas.1909865116
- Serological inference of past primary and secondary dengue infection: implications for vaccination.
Lam HM, Phuong HT, Thao Vy NH, Le Thanh NT, Dung PN, Ngoc Muon TT, Van Vinh Chau N, Rodríguez-Barraquer I, Cummings DAT, Wills BA, Boni MF, Rabaa MA, Clapham HE.
Journal of the Royal Society Interface, 2019: 16(156):20190207
https://doi.org/10.1098/rsif.2019.0207
- Opportunities for improved surveillance and control of dengue from age-specific case data
Rodriguez-Barraquer I, Salje H, Cummings DAT.
Elife, 2019: 8:e45474.
https://doi.org/10.7554/eLife.45474
- Impact of preexisting dengue immunity on Zika virus emergence in a dengue endemic region.
Isabel Rodriguez-Barraquer1,*, Federico Costa2,3,4,*, Eduardo J. M. Nascimento, Nivison Nery Júnior, Priscila M. S. Castanha, Gielson Almeida Sacramento, Jaqueline Cruz, Mayara Carvalho, Daiana De Olivera, José E. Hagan, Haritha Adhikarla, Elsio A. Wunder Jr., Danilo F. Coêlho, Sasha R. Azar, Shannan L. Rossi, Nikos Vasilakis, Scott C. Weaver, Guilherme S. Ribeiro, Angel Balmaseda, Eva Harris, Maurício L. Nogueira, Mitermayer G. Reis, Ernesto T. A. Marques, Derek A. T. Cummings, Albert I. Ko
Science, 2019; 363: 607-610.
doi: 10.1126/science.aav6618
- Viridot: An automated virus plaque (immunofocus) counter for the measurement of serological neutralizing responses with application to dengue virus.
Katzelnick LC, Coello Escoto A, McElvany BD, Chávez C, Salje H, Luo W, Rodriguez-Barraquer I, Jarman R, Durbin AP, Diehl SA, Smith DJ, Whitehead SS, Cummings DAT
PLoS Negl Trop Dis, 2018; 12: 10.
doi: 10.1371/journal.pntd.000686
- Understanding dengue virus evolution to support epidemic surveillance and counter-measure development
Pollett S, Melendrez MC, Maljkovic Berry I, Duchene S, Salje H, Cummings DAT, Jarman RG.
Infection, 2018: 213(9):62:279-95.
https://doi.org/10.1016/j.meegid.2018.04.032
- Immune status alters the probability of apparent illness due to dengue virus infection: Evidence from a pooled analysis across multiple cohort and cluster studies.
Clapham HE, Cummings DAT, Johansson MA.
PLoS Negl Trop Dis. 2017; 11(9): e0005926.
doi: 10.1371/journal.pntd.0005926
- Immune correlates of protection for dengue: State of the art and research agenda.
Katzelnick LC, Harris E; Participants in the Summit on Dengue Immune Correlates of Protection.
Vaccine, 2017; 35(36): 4659-4669.
doi: 10.1016/j.vaccine.2017.07.045
- Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size.
Salje H, Lessler J, Maljkovic Berry I, Melendrez MC, Endy T, Kalayanarooj S, A-Nuegoonpipat A, Chanama S, Sangkijporn S, Klungthong C, Thaisomboonsuk B, Nisalak A, Gibbons RV, Iamsirithaworn S, Macareo LR, Yoon IK, Sangarsang A, Jarman RG, Cummings DA.
Science, 2017; 355(6331): 1302-1306.
doi: 10.1126/science.aaj9384
